研究目的
Investigating the adsorption behaviours of acetylcholinesterase on charged self-assembled monolayers to understand its impact on the development of electrochemical biosensors for pesticide detection.
研究成果
The study concludes that positively charged surfaces are more suitable for the immobilization of TcAChE, providing a better microenvironment for efficient bio-catalytic reactions and quick direct electron transfer. The native conformation of TcAChE is well preserved after adsorption, with only slight conformational changes on flexible structures.
研究不足
The study focuses on low surface coverage conditions and does not consider high surface coverage or interactions between multiple protein molecules due to computational resource limitations.
1:Experimental Design and Method Selection:
The study employs parallel tempering Monte Carlo (PTMC) and all-atom molecular dynamics (AAMD) simulations to investigate the adsorption orientation and conformation of AChE on charged surfaces.
2:Sample Selection and Data Sources:
The initial X-ray diffraction structure of TcAChE (PDB code: 1EA5) is obtained from the Protein Data Bank.
3:List of Experimental Equipment and Materials:
The study uses GROMACS
4:7 software package with the CHARMM force field for simulations. Experimental Procedures and Operational Workflow:
PTMC simulations are first performed to determine preliminary orientations, followed by AAMD simulations for detailed adsorption behavior analysis.
5:Data Analysis Methods:
The analysis includes RMSD, RMSF, dipole moment, gyration radius, eccentricity, and superimposed structures to evaluate conformational changes.
独家科研数据包,助您复现前沿成果,加速创新突破
获取完整内容