研究目的
Automatic detection of lymph node metastases from whole-slide images to alleviate pathologists' workload and reduce misdiagnosis rate in breast cancer diagnosis.
研究成果
The proposed Fast ScanNet framework achieves state-of-the-art performance in lymph node metastasis detection, surpassing human performance and other methods in accuracy and speed, making it suitable for clinical practice with processing times under one minute per WSI.
研究不足
The method may be limited by the need for large annotated datasets, potential for further improvements with more powerful network architectures or loss functions, and reliance on simple post-processing for classification tasks.
1:Experimental Design and Method Selection:
The study uses a modified fully convolutional network (FCN) based on VGG16, incorporating anchor layers for dense scanning, asynchronous sample prefetching, and hard negative mining.
2:Sample Selection and Data Sources:
The dataset from the 2016 Camelyon Grand Challenge, consisting of 400 whole-slide images (WSIs) of lymph node sections from breast cancer patients, with 160 normal and 110 tumor images for training, and a validation set of 40 abnormal and 28 normal WSIs.
3:List of Experimental Equipment and Materials:
Workstation with eight Geforce GTX TITAN X GPU cards, Dual Inter Xeon(R) E5-2623 v4@
4:60GHz CPUs, 512GB ECC Memory, 7TB SSD, and TensorFlow library. Experimental Procedures and Operational Workflow:
Pre-processing with OTSU method to remove non-informative regions, feeding ROIs into Fast ScanNet for inference, stitching heat maps, and post-processing with morphology operations.
5:Data Analysis Methods:
Evaluation using Free Response Operating Characteristic (FROC) curve for tumor localization and receiver operating curve (ROC) with area under curve (AUC) for WSI classification.
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