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Does the wavelength dependent photoisomerization process of the p?coumaric acid come out from the electronic state dependent pathways?
摘要： Similar to the anion photoactive yellow protein (PYP) chromophore, the neutral form of the PYP chromophore was also found to exhibit a the wavelength-dependent photoisomerization quantum yield. The isomerization quantum yield increases with the increasing excitation energy on the S1 state, while decreases when being excited to the S2 state. Does this wavelength dependent product yield come out from the specific reaction pathways of the S1 and S2 states? This would mean that, the relaxation pathway of the S2 state is distinct from that of the S1 state and does not involve twisting motion. Does it break Kasha's rule by exhibiting a direct transition from the S2 state to the ground state? The underlying mechanism needs further in. In this article, we employed the on-the-fly dynamics simulations and static electronic structure calculations to reveal the deactivation mechanism of the neutral form of the PYP chromophore. Our results indicated that the C_C twisting motion dominates the S1 state decay process. In contrast, for the decay process of the S2 state, an ultrafast transition from the S2 to the S1 state through a planar conical intersection is observed, and the excess energy activates a new reaction channel to the ground state characterized by a puckering distortion of the ring. This pathway competes with the photoisomerization channel. No direct transition from S2 to S0 is observed, hence Kasha's rule is valid for this process. Our calcualtions can provide a reasonable explanation of the wavelength-dependent isomerization quantum yield of neutral PYP chromophore, and we hope it can provide theoretical foundations for comparing the effect of protonation state on the dynamcal behaviors of PYP chromophore.
关键词： Wavelength dependent,Photoisomerization,Fluorescent protein,Nonadiabatic process
更新于2025-09-23 15:23:52
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Analysis of trajectory similarity and configuration similarity in on-the-fly surface-hopping simulation on multi-channel nonadiabatic photoisomerization dynamics
摘要： We propose an “automatic” approach to analyze the results of the on-the-fly trajectory surface hopping simulation on the multi-channel nonadiabatic photoisomerization dynamics by considering the trajectory similarity and the configuration similarity. We choose a representative system phytochromobilin (PΦB) chromophore model to illustrate the analysis protocol. After a large number of trajectories are obtained, it is possible to define the similarity of different trajectories by the Fréchet distance and to employ the trajectory clustering analysis to divide all trajectories into several clusters. Each cluster in principle represents a photoinduced isomerization reaction channel. This idea provides an effective approach to understand the branching ratio of the multi-channel photoisomerization dynamics. For each cluster, the dimensionality reduction is employed to understand the configuration similarity in the trajectory propagation, which provides the understanding of the major geometry evolution features in each reaction channel. The results show that this analysis protocol not only assigns all trajectories into different photoisomerization reaction channels but also extracts the major molecular motion without the requirement of the pre-known knowledge of the active photoisomerization site. As a side product of this analysis tool, it is also easy to find the so-called “typical” or “representative” trajectory for each reaction channel.
关键词： trajectory similarity,multi-channel nonadiabatic photoisomerization dynamics,Fréchet distance,dimensionality reduction,phytochromobilin chromophore,on-the-fly surface-hopping simulation,configuration similarity,clustering analysis
更新于2025-09-23 15:23:52
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Multi-configurational Ehrenfest simulations of ultrafast nonadiabatic dynamics in a charge-transfer complex
摘要： Multi-configurational Ehrenfest (MCE) approaches, which are intended to remedy the lack of correlations in the standard mean-field Ehrenfest method, have been proposed as coherent-state based ans?tze for quantum propagation [D. V. Shalashilin, J. Chem. Phys. 130, 244101 (2009)] and also as the classical limit of the variational Gaussian-based multiconfiguration time dependent Hartree (G-MCTDH) method [S. R?mer and I. Burghardt, Mol. Phys. 111, 3618 (2013)]. In the present paper, we establish the formal connection between these schemes and assess the performance of MCE for a coherent-state representation of the classical-limit subsystem. As a representative model system, we address the ultrafast, coherent charge transfer dynamics in an oligothiophene-fullerene donor-acceptor complex described by a two-state linear vibronic coupling model. MCE calculations are compared with reference calculations performed with the MCTDH method, for 10–40 vibrational modes. Beyond a dimensionality of 10 modes, it is shown that the correct representation of electronic coherence depends crucially on the sampling of initially unoccupied Gaussians.
关键词： nonadiabatic dynamics,Multi-configurational Ehrenfest,Gaussian wavepackets,MCTDH,ultrafast dynamics,charge-transfer complex
更新于2025-09-23 15:23:52
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Ultrafast dynamics of solvated electrons at anatase TiO<sub>2</sub>/H<sub>2</sub>O interface
摘要： Solvated electrons are known to be the lowest energy charge transfer pathways at oxide/aqueous interface and the understanding of the electron transfer dynamics at the interface is fundamental for photochemical and photocatalytic processes. Taking anatase TiO2/H2O interface as a prototypical system, we perform time-dependent ab initio nonadiabatic molecular dynamics (NAMD) calculations to study the charge transfer dynamics of solvated electrons. For the static electronic properties, we find that the dangling H atoms can stabilize solvated electrons. A solvated electron band can be formed with one monolayer H2O adsorption. The energies of the solvated electron band minimum decrease when H2O adsorbs dissociatively. Moreover, the surface oxygen vacancies are also helpful for stabilizing the solvated electron band. For the dynamics behaviour, we find that the ultrafast charge transfer from solvated electron band minimum to anatase TiO2(101) surface at 100 K is mainly contributed by nonadiabatic mechanism. Comparing with rutile TiO2(110) surface, the lifetime of solvated electron on anatase TiO2 (101) surface is longer, suggesting a better photocatalytic properties. Our results provide essential insights into the understanding of the charge transfer dynamics and the possible photocatalytic mechanism at oxide/aqueous interface.
关键词： nonadiabatic molecular dynamics,solvated electron,oxide/aqueous interface
更新于2025-09-23 15:23:52
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Efficient separation of photo-generated charges in a ferroelectric molecular wire: nonadiabatic dynamics study on 3,5-dicyano-1,7-dimethylopyrrolo[3,2-f]indole trimer
摘要： In this work we propose and verify computationally a novel idea of spontaneous separation of charges photo-generated in a highly polar molecular 'wire'. The nuclear and electronic structure of the investigated system, so as the evolution of charge carriers, are characterized at the semi-empirical OM2/MRCI level of theory. Results point to the conclusion that 90% of optically prepared excitons break into charge carriers (holes and electrons) localized on the opposite monomeric units of the trimer on the time scale of 30 fs. Our findings can be helpful in design of photoactive and conducting components for molecular photovoltaic applications.
关键词： ferroelectric polymers,nonadiabatic molecular dynamics,molecular photovoltaics,photo-generated charge separation,molecular wire
更新于2025-09-23 15:22:29
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Ultrafast X-ray Transient Absorption Spectroscopy of Gas-Phase Photochemical Reactions: A New Universal Probe of Photoinduced Molecular Dynamics
摘要： Time-resolved spectroscopic investigations of light-induced chemical reactions with universal detection capitalize recently on single-photon molecular probing using laser pulses in the extreme ultraviolet or X-ray regimes. Direct and simultaneous mappings of the time-evolving populations of ground-state reactants, Franck?Condon (FC) and transition state regions, excited-state intermediates and conical intersections (CI), and photoproducts in photochemical reactions utilize probe pulses that are broadband and energy-tunable. The limits on temporal resolution are set by the transit- or dwell-time of the photoexcited molecules at specific locations on the potential energy surface, typically ranging from a few femtoseconds to several hundred picoseconds. Femtosecond high-harmonic generation (HHG) meets the stringent demands for a universal spectroscopic probe of large regions of the intramolecular phase-space in unimolecular photochemical reactions. Extreme-ultraviolet and soft X-ray pulses generated in this manner with few-femtosecond or sub-femtosecond durations have enormous bandwidths, allowing the probing of many elements simultaneously through excitation or ionization of core?electrons, creating molecular movies that shed light on entire photochemical pathways. At free electron lasers (FELs), powerful investigations are also possible, recognizing their higher flux and tunability but more limited bandwidths. Femtosecond time-resolved X-ray transient absorption spectroscopy, in particular, is a valuable universal probe of reaction pathways that maps changes via the fingerprint core-to-valence resonances. The particular power of this method over valence-ionization probes lies in its unmatched element and chemical-site specificities. The elements carbon, nitrogen, and oxygen constitute the fundamental building blocks of life; photochemical reactions involving these elements are ubiquitous, diverse, and manifold. However, table-top HHG sources in the “water-window” region (280?550 eV), which encompasses the 1s-absorption edges of carbon (284 eV), nitrogen (410 eV), and oxygen (543 eV), are far from abundant or trivial. Recent breakthroughs in the laboratory have embraced this region by using long driving-wavelength optical parametric amplifiers coupled with differentially pumped high-pressure gas source cells. This has opened avenues to study a host of photochemical reactions in organic molecules using femtosecond time-resolved transient absorption at the carbon K-edge. In this Account, we summarize recent efforts to deploy a table-top carbon K-edge source to obtain crucial chemical insights into ultrafast, ultraviolet-induced chemical reactions involving ring-opening, nonadiabatic excited-state relaxation, bond dissociation and radical formation. The X-ray probe provides a direct spectroscopic viewport into the electronic characters and configurations of the valence electronic states through spectroscopic core-level transitions into the frontier molecular orbitals of the photoexcited molecules, laying fertile ground for the real-time mapping of the evolving valence electronic structure. The profound detail and mechanistic insights emerging from the pioneering experiments at the carbon K-edge are outlined here. Comparisons of the experimental methodology with other techniques employed to study similar reactions are drawn, where applicable and relevant. We show that femtosecond time-resolved X-ray transient absorption spectroscopy blazes a new trail in the study of nonadiabatic molecular dynamics. Despite table-top implementations being largely in their infancy, future chemical applications of the technique will set the stage for widely applicable, universal probes of photoinduced molecular dynamics with unprecedented temporal resolution.
关键词： time-resolved spectroscopy,photochemical reactions,high-harmonic generation,X-ray transient absorption spectroscopy,nonadiabatic molecular dynamics
更新于2025-09-23 15:21:21
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Nonadiabatic Geometric Quantum Computation with Parametrically Tunable Coupling
摘要： Nonadiabatic geometric quantum computation is promising as it is robust against certain types of local noises. However, its experimental implementation is challenging due to the need for complex control on multilevel and/or multiple quantum systems. Here, we propose to implement it on a two-dimensional square superconducting qubit lattice. In the construction of our geometric quantum gates, we only use the simplest and experimentally accessible control over the qubit states of the involved quantum systems, without introducing any auxiliary state. Specifically, our scheme is achieved by parametrically tunable all-resonant interaction, which leads to high-fidelity quantum gates. Meanwhile, this simple implementation can be conveniently generalized to a composite scenario, which can further suppress the systematic error during the gate operations. In addition, universal nonadiabatic geometric quantum gates in decoherence-free subspace can also be realized based on the tunable coupling between only two transmon qubits, without consulting multiple qubits and only using two physical qubits to encode a logical qubit. Therefore, our proposal provides a promising way to achieve high-fidelity geometric manipulation for robust solid-state quantum computation.
关键词： decoherence-free subspace,parametrically tunable coupling,Nonadiabatic geometric quantum computation,superconducting qubit lattice
更新于2025-09-23 15:21:21
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Nonadiabatic Dynamics in a Laser Field: Using Floquet Fewest Switches Surface Hopping To Calculate Electronic Populations for Slow Nuclear Velocities
摘要： We investigate two well-known approaches for extending the fewest switches surface hopping (FSSH) algorithm to periodic time-dependent couplings. The first formalism acts as if the instantaneous adiabatic electronic states were standard adiabatic states, which just happen to evolve in time. The second formalism replaces the role of the usual adiabatic states by the time-independent adiabatic Floquet states. For a set of modified Tully model problems, the Floquet FSSH (F-FSSH) formalism gives a better estimate for both transmission and reflection probabilities than the instantaneous adiabatic FSSH (IA-FSSH) formalism, especially for slow nuclear velocities. More importantly, only F-FSSH predicts the correct final scattering momentum. Finally, in order to use Floquet theory accurately, we find that it is crucial to account for the interference between wavepackets on different Floquet states. Our results should be of interest to all those interested in laser-induced molecular dynamics.
关键词： Electronic Populations,Nonadiabatic Dynamics,Floquet Fewest Switches Surface Hopping,Slow Nuclear Velocities,Laser Field
更新于2025-09-23 15:19:57
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Three-player polaritons: nonadiabatic fingerprints in an entangled atom-molecule-photon system
摘要： A quantum system composed of a molecule and an atomic ensemble, con?ned in a microscopic cavity, is investigated theoretically. The indirect coupling between atoms and the molecule, realized by their interaction with the cavity radiation mode, leads to a coherent mixing of atomic and molecular states. It is shown for the Na2 molecule that by changing the cavity wavelength and the molecular states, and at strong enough cavity ?eld strengths hybrid atom-molecule-photon polaritons are formed. Moreover, an unforeseen intensity borrowing e?ect, which can be seen as a strong nonadiabatic ?ngerprint, is identi?ed in the atomic transition peak, originating from the contamination of the atomic excited state with excited molecular rovibronic states.
关键词： nonadiabatic,entangled atom-molecule-photon system,intensity borrowing effect,polaritons,cavity quantum electrodynamics
更新于2025-09-23 15:19:57
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First-principles study of electron dynamics with explicit treatment of momentum dispersion on Si nanowires along different directions
摘要： In this research, ground-state electronic structure and optical properties along with photoinduced electron dynamics of Si nanowires oriented in various directions are reviewed. These nanowires are significant functional units of future nano-electronic devices. All observables are computed for a distribution of wave vectors at ambient temperature. Optical properties are computed under the approximation of momentum conservation. The total absorption is composed of partial contributions from fixed values of momentum. The on-the-fly non-adiabatic couplings obtained along the ab initio molecular dynamics nuclear trajectories are used as parameters for Redfield density matrix equation of motion. The main outcomes of this study are transition energies, light absorption spectra, electron and hole relaxation rates, and electron transport properties. The results of these calculations would contribute to the understanding of the mechanism of electron transfer process on the Si nanowires for optoelectronic applications.
关键词： nanowires,excited state dynamics,nonadiabatic,Momentum dispersion,silicon
更新于2025-09-19 17:15:36