研究目的
To investigate the use of photoswitchable azobenzene derivatives in affibody molecules for reversible and non-destructive control of protein-protein interactions, specifically targeting immunoglobulin G (IgG).
研究成果
The study successfully demonstrated the incorporation of an azobenzene-based photoswitch in the affibody scaffold to generate a light-controllable affinity protein. The ZC3 variant showed efficient binding to IgG and could be eluted by light, indicating potential applications in affinity chromatography and other biotechnological applications requiring reversible protein-protein interactions.
研究不足
The system is not fully optimized as part of the protein remained in the column and was eluted during subsequent regeneration by acid, indicating incomplete light elution. The light source's positioning and the sepharose medium may have blocked or quenched the light from reaching all captured protein.
1:Experimental Design and Method Selection:
The study involved the design and synthesis of three Z domain variants (ZC2, ZC3, ZC4) with incorporated azobenzene photoswitches. The methodology included solid phase peptide synthesis, conjugation of the photoswitch, and screening for light-controlled binding and elution from an IgG-sepharose affinity column.
2:Sample Selection and Data Sources:
The Z domain variants were designed based on the NMR structure of the Z domain of Staphylococcus aureus protein A. The proteins were synthesized and purified for experimental use.
3:List of Experimental Equipment and Materials:
Equipment included an automated SPPS system, HPLC, MALDI-MS, ?KTAexplorer system, Biacore T200 system, and JASCO J-810 spectropolarimeter. Materials included IgG-sepharose, NHS-sepharose, and various chemicals for peptide synthesis and conjugation.
4:Experimental Procedures and Operational Workflow:
The workflow involved peptide synthesis, purification, conjugation to the photoswitch, screening for light-controlled elution, SPR analysis, and CD spectroscopy.
5:Data Analysis Methods:
Data analysis included MALDI-MS for molecular weight confirmation, HPLC for purity assessment, SPR for binding kinetics, and CD for secondary structure analysis.
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Agilent 1200 series
Agilent 1200 series
Agilent Technologies
Reversed phase HPLC system for peptide purification.
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Zorbax 300SB-C18
Zorbax 300SB-C18
Agilent Technologies
Semi-preparative column for peptide purification.
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JASCO J-810 spectropolarimeter
JASCO J-810 spectropolarimeter
JASCO
Circular dichroism (CD) spectroscopy for secondary structure analysis.
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Initiator+ Alstra
Initiator+ Alstra
Biotage
Automated microwave-assisted system for solid phase peptide synthesis.
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Rink amide resin
Rink amide resin
ChemMatrix, Biotage
Solid support for peptide synthesis.
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MALDI TOF/TOF analyzer
MALDI TOF/TOF analyzer
Sciex
Mass spectrometry for molecular weight confirmation.
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?KTAexplorer system
?KTAexplorer system
GE Healthcare
System for screening photoswitch-conjugated proteins for light-controlled elution.
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IgG-sepharose
Sepharose 6 fast flow
GE Healthcare
Affinity chromatography medium for binding and elution assays.
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NHS-sepharose
4 fast flow
GE Healthcare
Affinity chromatography medium for coupling proteins.
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Biacore T200 system
Biacore T200 system
GE Healthcare
Surface plasmon resonance (SPR) system for binding kinetics analysis.
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CM5 chip
CM5 chip
GE Healthcare
Carboxymethylated, dextran-coated chip for SPR analysis.
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