研究目的
To demonstrate 1 nm resolution in three dimensions in real-time with a GPU based on a CUDA parallel computing framework for high-throughput single molecule techniques with high resolution and efficiency.
研究成果
The advances in both process programs and instruments pave the way for high-throughput single molecule studies, drug screening and other research in life sciences.
研究不足
The efficiency and accuracy could be further improved with a supercomputer and precision imaging systems, respectively.
1:Experimental Design and Method Selection:
Utilized a GPU based on a CUDA parallel computing framework for real-time tracking of multiple particles.
2:Sample Selection and Data Sources:
Tracked multiple DNA-tethered particles using a self-built centrifugal force microscope (CFM).
3:List of Experimental Equipment and Materials:
Included a CCD (Prosilica GT2450), an LED (780 nm, 5 V, Thorlabs), an objective (50×, numerical aperture (NA)
4:55, Nikon), and a nanostage (PI, P-3, 100 μm × 100 μm). Experimental Procedures and Operational Workflow:
Images for the experimental data and the artificial image construction were acquired with a CCD. The GPU was employed for processing.
5:Data Analysis Methods:
The positions of immobilised beads were measured to evaluate the performance of the procedure.
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CCD
Prosilica GT2450
Allied Vision
Acquiring images for the experimental data and the artificial image construction
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LED
780 nm, 5 V
Thorlabs
Part of the video light microscope system
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Nanostage
PI, P-733.3, 100 μm × 100 μm
PI
Collecting standard image data for particle tracking
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Graphics card
NVIDIA GeForce GTX 950m
NVIDIA
Processing images for real-time tracking
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Objective
50×, numerical aperture (NA) 0.55
Nikon
Part of the video light microscope system
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